EMC2 crashes when starting up.

I had the updates on and installed quite a few so don't know if that caused this or not. I'm assuming this is the correct place to put this log file? It looks like it crashed when starting axis?

Print file information:
RUN_IN_PLACE=no
EMC2_DIR=
EMC2_BIN_DIR=/usr/bin
EMC2_TCL_DIR=/usr/share/emc/tcl
EMC2_SCRIPT_DIR=
EMC2_RTLIB_DIR=/usr/realtime-2.6.24-16-rtai/modules/emc2
EMC2_CONFIG_DIR=
EMC2_LANG_DIR=/usr/share/emc/tcl/msgs
INIVAR=inivar
HALCMD=halcmd
EMC2_EMCSH=emcsh
EMC2_IOSH=iosh
EMC2 - 2.3.5
Machine configuration directory is '/home/david/emc2/configs/my-mill'
Machine configuration file is 'my-mill.ini'
INIFILE=/home/david/emc2/configs/my-mill/my-mill.ini
PARAMETER_FILE=emc.var
EMCMOT=motmod
EMCIO=io
TASK=milltask
HALUI=halui
DISPLAY=axis
NML_FILE=emc.nml
Starting EMC2...
Starting EMC2 server program: emcsvr
Loading Real Time OS, RTAPI, and HAL_LIB modules
Starting EMC2 IO program: io
Starting HAL User Interface program: halui
Starting EMC2 TASK program: milltask
Starting EMC2 DISPLAY program: axis
Shutting down and cleaning up EMC2...
Killing task emcsvr, PID=5905
Killing task milltask, PID=6033
Removing HAL_LIB, RTAPI, and Real Time OS modules
Removing NML shared memory segments
Cleanup done

Kernel message information:
[ 0.000000] Linux version 2.6.24-16-rtai (root@hardy) (gcc version 4.2.3 (Ubuntu 4.2.3-2ubuntu7)) #1 Tue Sep 30 22:54:33 EEST 2008 (Ubuntu 2.6.24-12.22-generic)
[ 0.000000] BIOS-provided physical RAM map:
[ 0.000000] BIOS-e820: 0000000000000000 - 00000000000a0000 (usable)
[ 0.000000] BIOS-e820: 00000000000f0000 - 0000000000100000 (reserved)
[ 0.000000] BIOS-e820: 0000000000100000 - 000000004fe86c00 (usable)
[ 0.000000] BIOS-e820: 000000004fe86c00 - 000000004fe88c00 (ACPI NVS)
[ 0.000000] BIOS-e820: 000000004fe88c00 - 000000004fe8ac00 (ACPI data)
[ 0.000000] BIOS-e820: 000000004fe8ac00 - 0000000050000000 (reserved)
[ 0.000000] BIOS-e820: 00000000e0000000 - 00000000f0000000 (reserved)
[ 0.000000] BIOS-e820: 00000000fec00000 - 00000000fed00400 (reserved)
[ 0.000000] BIOS-e820: 00000000fed20000 - 00000000feda0000 (reserved)
[ 0.000000] BIOS-e820: 00000000fee00000 - 00000000fef00000 (reserved)
[ 0.000000] BIOS-e820: 00000000ffb00000 - 0000000100000000 (reserved)
[ 0.000000] 382MB HIGHMEM available.
[ 0.000000] 896MB LOWMEM available.
[ 0.000000] Entering add_active_range(0, 0, 327302) 0 entries of 256 used
[ 0.000000] Zone PFN ranges:
[ 0.000000] DMA 0 -> 4096
[ 0.000000] Normal 4096 -> 229376
[ 0.000000] HighMem 229376 -> 327302
[ 0.000000] Movable zone start PFN for each node
[ 0.000000] early_node_map[1] active PFN ranges
[ 0.000000] 0: 0 -> 327302
[ 0.000000] On node 0 totalpages: 327302
[ 0.000000] DMA zone: 32 pages used for memmap
[ 0.000000] DMA zone: 0 pages reserved
[ 0.000000] DMA zone: 4064 pages, LIFO batch:0
[ 0.000000] Normal zone: 1760 pages used for memmap
[ 0.000000] Normal zone: 223520 pages, LIFO batch:31
[ 0.000000] HighMem zone: 765 pages used for memmap
[ 0.000000] HighMem zone: 97161 pages, LIFO batch:31
[ 0.000000] Movable zone: 0 pages used for memmap
[ 0.000000] DMI 2.3 present.
[ 0.000000] Allocating PCI resources starting at 60000000 (gap: 50000000:90000000)
[ 0.000000] Built 1 zonelists in Zone order, mobility grouping on. Total pages: 324745
[ 0.000000] Kernel command line: root=UUID=f04baad2-10da-49c1-ae5e-2b1d52d2bde4 ro quiet splash
[ 0.000000] Enabling fast FPU save and restore... done.
[ 0.000000] Enabling unmasked SIMD FPU exception support... done.
[ 0.000000] Initializing CPU#0
[ 0.000000] PID hash table entries: 4096 (order: 12, 16384 bytes)
[ 0.000000] Detected 3192.249 MHz processor.
[ 13.801468] I-pipe 2.0-04: pipeline enabled.
[ 13.803100] Console: colour VGA+ 80x25
[ 13.803104] console [tty0] enabled
[ 13.803599] Dentry cache hash table entries: 131072 (order: 7, 524288 bytes)
[ 13.804103] Inode-cache hash table entries: 65536 (order: 6, 262144 bytes)
[ 13.836165] Memory: 1287596k/1309208k available (1440k kernel code, 20240k reserved, 573k data, 228k init, 391704k highmem)
[ 13.836175] virtual kernel memory layout:
[ 13.836176] fixmap : 0xfffed000 - 0xfffff000 ( 72 kB)
[ 13.836177] pkmap : 0xff800000 - 0xffc00000 (4096 kB)
[ 13.836178] vmalloc : 0xf8800000 - 0xff7fe000 ( 111 MB)
[ 13.836179] lowmem : 0xc0000000 - 0xf8000000 ( 896 MB)
[ 13.836180] .init : 0xc02fa000 - 0xc0333000 ( 228 kB)
[ 13.836181] .data : 0xc026836d - 0xc02f77ec ( 573 kB)
[ 13.836182] .text : 0xc0100000 - 0xc026836d (1440 kB)
[ 13.836185] Checking if this processor honours the WP bit even in supervisor mode... Ok.
[ 13.836229] SLUB: Genslabs=11, HWalign=64, Order=0-1, MinObjects=4, CPUs=1, Nodes=1
[ 13.916052] Calibrating delay using timer specific routine.. 6387.60 BogoMIPS (lpj=12775217)
[ 13.916077] Security Framework initialized
[ 13.916081] SELinux: Disabled at boot.
[ 13.916093] AppArmor: AppArmor initialized
[ 13.916099] Failure registering capabilities with primary security module.
[ 13.916106] Mount-cache hash table entries: 512
[ 13.916210] CPU: After generic identify, caps: bfebfbff 20100000 00000000 00000000 0000649d 00000000 00000000 00000000
[ 13.916216] monitor/mwait feature present.
[ 13.916221] CPU: Trace cache: 12K uops, L1 D cache: 16K
[ 13.916223] CPU: L2 cache: 2048K
[ 13.916225] CPU: After all inits, caps: bfebfbff 20100000 00000000 0000b180 0000649d 00000000 00000000 00000000
[ 13.916233] Compat vDSO mapped to ffffe000.
[ 13.916244] CPU: Intel(R) Pentium(R) 4 CPU 3.20GHz stepping 03
[ 13.916252] Checking 'hlt' instruction... OK.
[ 13.932219] Freeing SMP alternatives: 0k freed
[ 13.932386] net_namespace: 64 bytes
[ 13.932853] NET: Registered protocol family 16
[ 13.933056] EISA bus registered
[ 13.933263] PCI: PCI BIOS revision 2.10 entry at 0xfb22b, last bus=4
[ 13.933265] PCI: Using configuration type 1
[ 13.933267] Setting up standard PCI resources
[ 13.934082] Linux Plug and Play Support v0.97 (c) Adam Belay
[ 13.934331] PCI: Probing PCI hardware
[ 13.934354] PCI: Probing PCI hardware (bus 00)
[ 13.934813] PCI quirk: region 0800-087f claimed by ICH6 ACPI/GPIO/TCO
[ 13.934817] PCI quirk: region 0880-08bf claimed by ICH6 GPIO
[ 13.935353] PCI: Transparent bridge - 0000:00:1e.0
[ 13.935990] PCI: Using IRQ router PIIX/ICH [8086/2640] at 0000:00:1f.0
[ 13.952041] AppArmor: AppArmor Filesystem Enabled
[ 13.952414] PCI: Bridge: 0000:00:01.0
[ 13.952417] IO window: d000-dfff
[ 13.952420] MEM window: dcf00000-dfffffff
[ 13.952423] PREFETCH window: c0000000-cfffffff
[ 13.952427] PCI: Bridge: 0000:00:1c.0
[ 13.952428] IO window: disabled.
[ 13.952432] MEM window: dce00000-dcefffff
[ 13.952435] PREFETCH window: disabled.
[ 13.952439] PCI: Bridge: 0000:00:1c.1
[ 13.952440] IO window: disabled.
[ 13.952444] MEM window: dcd00000-dcdfffff
[ 13.952447] PREFETCH window: disabled.
[ 13.952451] PCI: Bridge: 0000:00:1e.0
[ 13.952453] IO window: disabled.
[ 13.952456] MEM window: disabled.
[ 13.952459] PREFETCH window: disabled.
[ 13.952474] PCI: setting IRQ 11 as level-triggered
[ 13.952477] PCI: Found IRQ 11 for device 0000:00:01.0
[ 13.952481] PCI: Sharing IRQ 11 with 0000:00:1c.0
[ 13.952492] PCI: Sharing IRQ 11 with 0000:00:1f.1
[ 13.952497] PCI: Sharing IRQ 11 with 0000:01:00.0
[ 13.952500] PCI: Sharing IRQ 11 with 0000:02:00.0
[ 13.952504] PCI: Setting latency timer of device 0000:00:01.0 to 64
[ 13.952521] PCI: Found IRQ 11 for device 0000:00:1c.0
[ 13.952524] PCI: Sharing IRQ 11 with 0000:00:01.0
[ 13.952537] PCI: Sharing IRQ 11 with 0000:00:1f.1
[ 13.952541] PCI: Sharing IRQ 11 with 0000:01:00.0
[ 13.952545] PCI: Sharing IRQ 11 with 0000:02:00.0
[ 13.952548] PCI: Setting latency timer of device 0000:00:1c.0 to 64
[ 13.952565] PCI: setting IRQ 10 as level-triggered
[ 13.952568] PCI: Found IRQ 10 for device 0000:00:1c.1
[ 13.952584] PCI: Sharing IRQ 10 with 0000:00:1f.3
[ 13.952590] PCI: Setting latency timer of device 0000:00:1c.1 to 64
[ 13.952600] PCI: Setting latency timer of device 0000:00:1e.0 to 64
[ 13.952608] NET: Registered protocol family 2
[ 13.955955] Time: tsc clocksource has been installed.
[ 13.987928] IP route cache hash table entries: 32768 (order: 5, 131072 bytes)
[ 13.988192] TCP established hash table entries: 131072 (order: 8, 1048576 bytes)
[ 13.988731] TCP bind hash table entries: 65536 (order: 6, 262144 bytes)
[ 13.988865] TCP: Hash tables configured (established 131072 bind 65536)
[ 13.988867] TCP reno registered
[ 13.999971] checking if image is initramfs... it is
[ 14.505279] Freeing initrd memory: 6491k freed
[ 14.505620] audit: initializing netlink socket (disabled)
[ 14.505632] audit(1268430614.672:1): initialized
[ 14.505778] highmem bounce pool size: 64 pages
[ 14.507425] VFS: Disk quotas dquot_6.5.1
[ 14.507449] Dquot-cache hash table entries: 1024 (order 0, 4096 bytes)
[ 14.507552] io scheduler noop registered
[ 14.507554] io scheduler anticipatory registered
[ 14.507556] io scheduler deadline registered
[ 14.507566] io scheduler cfq registered (default)
[ 14.522581] Boot video device is 0000:01:00.0
[ 14.522671] PCI: Setting latency timer of device 0000:00:01.0 to 64
[ 14.522703] assign_interrupt_mode Found MSI capability
[ 14.522705] Allocate Port Service[0000:00:01.0:pcie00]
[ 14.522773] PCI: Setting latency timer of device 0000:00:1c.0 to 64
[ 14.522810] assign_interrupt_mode Found MSI capability
[ 14.522812] Allocate Port Service[0000:00:1c.0:pcie00]
[ 14.522843] Allocate Port Service[0000:00:1c.0:pcie02]
[ 14.522918] PCI: Setting latency timer of device 0000:00:1c.1 to 64
[ 14.522953] assign_interrupt_mode Found MSI capability
[ 14.522956] Allocate Port Service[0000:00:1c.1:pcie00]
[ 14.523121] isapnp: Scanning for PnP cards...
[ 14.874061] isapnp: No Plug & Play device found
[ 14.902912] Real Time Clock Driver v1.12ac
[ 14.902916] Serial: 8250/16550 driver $Revision: 1.90 $ 4 ports, IRQ sharing enabled
[ 14.903035] serial8250: ttyS0 at I/O 0x3f8 (irq = 4) is a 16550A
[ 14.903968] RAMDISK driver initialized: 16 RAM disks of 65536K size 1024 blocksize
[ 14.904040] input: Macintosh mouse button emulation as /devices/virtual/input/input0
[ 14.904164] PNP: No PS/2 controller found. Probing ports directly.
[ 14.906663] serio: i8042 KBD port at 0x60,0x64 irq 1
[ 14.906667] serio: i8042 AUX port at 0x60,0x64 irq 12
[ 14.917664] mice: PS/2 mouse device common for all mice
[ 14.917771] EISA: Probing bus 0 at eisa.0
[ 14.917797] EISA: Detected 0 cards.
[ 14.917868] NET: Registered protocol family 1
[ 14.917878] Using IPI Shortcut mode
[ 14.917952] BIOS EDD facility v0.16 2004-Jun-25, 0 devices found
[ 14.917954] EDD information not available.
[ 14.918081] Freeing unused kernel memory: 228k freed
[ 16.105233] fuse init (API version 7.9)
[ 16.263947] tg3.c:v3.86 (November 9, 2007)
[ 16.263972] PCI: Found IRQ 11 for device 0000:02:00.0
[ 16.263977] PCI: Sharing IRQ 11 with 0000:00:01.0
[ 16.263980] PCI: Sharing IRQ 11 with 0000:00:1c.0
[ 16.263991] PCI: Sharing IRQ 11 with 0000:00:1f.1
[ 16.263996] PCI: Sharing IRQ 11 with 0000:01:00.0
[ 16.264006] PCI: Setting latency timer of device 0000:02:00.0 to 64
[ 16.285987] eth0: Tigon3 [partno(BCM95751) rev 4001 PHY(5750)] (PCI Express) 10/100/1000Base-T Ethernet 00:12:3f:8a:5c:34
[ 16.285994] eth0: RXcsums[1] LinkChgREG[0] MIirq[0] ASF[0] WireSpeed[1] TSOcap[1]
[ 16.285997] eth0: dma_rwctrl[76180000] dma_mask[64-bit]
[ 16.294955] usbcore: registered new interface driver usbfs
[ 16.294975] usbcore: registered new interface driver hub
[ 16.304943] usbcore: registered new device driver usb
[ 16.305813] USB Universal Host Controller Interface driver v3.0
[ 16.305855] PCI: setting IRQ 9 as level-triggered
[ 16.305859] PCI: Found IRQ 9 for device 0000:00:1d.0
[ 16.305871] PCI: Sharing IRQ 9 with 0000:00:1d.7
[ 16.305887] PCI: Setting latency timer of device 0000:00:1d.0 to 64
[ 16.305890] uhci_hcd 0000:00:1d.0: UHCI Host Controller
[ 16.306103] uhci_hcd 0000:00:1d.0: new USB bus registered, assigned bus number 1
[ 16.306129] uhci_hcd 0000:00:1d.0: irq 9, io base 0x0000ff80
[ 16.306340] usb usb1: configuration #1 chosen from 1 choice
[ 16.306363] hub 1-0:1.0: USB hub found
[ 16.306369] hub 1-0:1.0: 2 ports detected
[ 16.367538] SCSI subsystem initialized
[ 16.393993] libata version 3.00 loaded.
[ 16.410044] PCI: setting IRQ 5 as level-triggered
[ 16.410049] PCI: Found IRQ 5 for device 0000:00:1d.1
[ 16.410077] PCI: Setting latency timer of device 0000:00:1d.1 to 64
[ 16.410081] uhci_hcd 0000:00:1d.1: UHCI Host Controller
[ 16.410103] uhci_hcd 0000:00:1d.1: new USB bus registered, assigned bus number 2
[ 16.410128] uhci_hcd 0000:00:1d.1: irq 5, io base 0x0000ff60
[ 16.410230] usb usb2: configuration #1 chosen from 1 choice
[ 16.410254] hub 2-0:1.0: USB hub found
[ 16.410260] hub 2-0:1.0: 2 ports detected
[ 16.513780] PCI: setting IRQ 3 as level-triggered
[ 16.513784] PCI: Found IRQ 3 for device 0000:00:1d.2
[ 16.513812] PCI: Setting latency timer of device 0000:00:1d.2 to 64
[ 16.513816] uhci_hcd 0000:00:1d.2: UHCI Host Controller
[ 16.513839] uhci_hcd 0000:00:1d.2: new USB bus registered, assigned bus number 3
[ 16.513864] uhci_hcd 0000:00:1d.2: irq 3, io base 0x0000ff40
[ 16.513960] usb usb3: configuration #1 chosen from 1 choice
[ 16.513984] hub 3-0:1.0: USB hub found
[ 16.513989] hub 3-0:1.0: 2 ports detected
[ 16.617520] PCI: Found IRQ 10 for device 0000:00:1d.3
[ 16.617548] PCI: Setting latency timer of device 0000:00:1d.3 to 64
[ 16.617551] uhci_hcd 0000:00:1d.3: UHCI Host Controller
[ 16.617573] uhci_hcd 0000:00:1d.3: new USB bus registered, assigned bus number 4
[ 16.617597] uhci_hcd 0000:00:1d.3: irq 10, io base 0x0000ff20
[ 16.617695] usb usb4: configuration #1 chosen from 1 choice
[ 16.617719] hub 4-0:1.0: USB hub found
[ 16.617724] hub 4-0:1.0: 2 ports detected
[ 16.649372] usb 1-2: new full speed USB device using uhci_hcd and address 2
[ 16.721394] PCI: Found IRQ 9 for device 0000:00:1d.7
[ 16.721403] PCI: Sharing IRQ 9 with 0000:00:1d.0
[ 16.721427] PCI: Setting latency timer of device 0000:00:1d.7 to 64
[ 16.721430] ehci_hcd 0000:00:1d.7: EHCI Host Controller
[ 16.721455] ehci_hcd 0000:00:1d.7: new USB bus registered, assigned bus number 5
[ 16.725361] ehci_hcd 0000:00:1d.7: debug port 1
[ 16.725367] PCI: cache line size of 128 is not supported by device 0000:00:1d.7
[ 16.725373] ehci_hcd 0000:00:1d.7: irq 9, io mem 0xffa80800
[ 16.777055] ehci_hcd 0000:00:1d.7: USB 2.0 started, EHCI 1.00, driver 10 Dec 2004
[ 16.777153] usb usb5: configuration #1 chosen from 1 choice
[ 16.777177] hub 5-0:1.0: USB hub found
[ 16.777184] hub 5-0:1.0: 8 ports detected
[ 16.881013] ata_piix 0000:00:1f.1: version 2.12
[ 16.881032] PCI: Found IRQ 11 for device 0000:00:1f.1
[ 16.881036] PCI: Sharing IRQ 11 with 0000:00:01.0
[ 16.881039] PCI: Sharing IRQ 11 with 0000:00:1c.0
[ 16.881054] PCI: Sharing IRQ 11 with 0000:01:00.0
[ 16.881057] PCI: Sharing IRQ 11 with 0000:02:00.0
[ 16.881096] PCI: Setting latency timer of device 0000:00:1f.1 to 64
[ 16.881691] scsi0 : ata_piix
[ 16.882171] scsi1 : ata_piix
[ 16.882200] ata1: PATA max UDMA/100 cmd 0x1f0 ctl 0x3f6 bmdma 0xffa0 irq 14
[ 16.882203] ata2: PATA max UDMA/100 cmd 0x170 ctl 0x376 bmdma 0xffa8 irq 15
[ 17.172665] usb 1-2: device not accepting address 2, error -71
[ 17.200388] ata1.00: ATAPI: HL-DT-ST GCR-8240N, 1.06, max UDMA/33
[ 17.371880] ata1.00: configured for UDMA/33
[ 17.371918] ata2: port disabled. ignoring.
[ 17.373365] scsi 0:0:0:0: CD-ROM HL-DT-ST CD-ROM GCR-8240N 1.06 PQ: 0 ANSI: 5
[ 17.373425] ata_piix 0000:00:1f.2: MAP [ P0 P2 P1 P3 ]
[ 17.527229] PCI: Found IRQ 5 for device 0000:00:1f.2
[ 17.527285] PCI: Setting latency timer of device 0000:00:1f.2 to 64
[ 17.527317] scsi2 : ata_piix
[ 17.527448] scsi3 : ata_piix
[ 17.527474] ata3: SATA max UDMA/133 cmd 0xfe00 ctl 0xfe10 bmdma 0xfea0 irq 5
[ 17.527477] ata4: SATA max UDMA/133 cmd 0xfe20 ctl 0xfe30 bmdma 0xfea8 irq 5
[ 17.691697] ata3.00: ATA-6: WDC WD400BD-75JMC0, 06.01C06, max UDMA/100
[ 17.691701] ata3.00: 78125000 sectors, multi 8: LBA
[ 17.699103] ata3.00: configured for UDMA/100
[ 17.722737] usb 5-2: new high speed USB device using ehci_hcd and address 2
[ 17.880475] usb 5-2: configuration #1 chosen from 1 choice
[ 18.488860] usb 2-1: new low speed USB device using uhci_hcd and address 2
[ 18.524888] scsi 2:0:0:0: Direct-Access ATA WDC WD400BD-75JM 06.0 PQ: 0 ANSI: 5
[ 18.534934] Driver 'sr' needs updating - please use bus_type methods
[ 18.541727] sr0: scsi3-mmc drive: 24x/24x cd/rw xa/form2 cdda tray
[ 18.541731] Uniform CD-ROM driver Revision: 3.20
[ 18.541773] sr 0:0:0:0: Attached scsi CD-ROM sr0
[ 18.546366] sr 0:0:0:0: Attached scsi generic sg0 type 5
[ 18.546385] scsi 2:0:0:0: Attached scsi generic sg1 type 0
[ 18.546443] Driver 'sd' needs updating - please use bus_type methods
[ 18.546504] sd 2:0:0:0: [sda] 78125000 512-byte hardware sectors (40000 MB)
[ 18.546518] sd 2:0:0:0: [sda] Write Protect is off
[ 18.546521] sd 2:0:0:0: [sda] Mode Sense: 00 3a 00 00
[ 18.546540] sd 2:0:0:0: [sda] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA
[ 18.546583] sd 2:0:0:0: [sda] 78125000 512-byte hardware sectors (40000 MB)
[ 18.546594] sd 2:0:0:0: [sda] Write Protect is off
[ 18.546597] sd 2:0:0:0: [sda] Mode Sense: 00 3a 00 00
[ 18.546614] sd 2:0:0:0: [sda] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA
[ 18.546618] sda: sda1 sda2 < sda5 >
[ 18.580775] sd 2:0:0:0: [sda] Attached SCSI disk
[ 18.671584] usb 2-1: configuration #1 chosen from 1 choice
[ 18.911824] usb 2-2: new low speed USB device using uhci_hcd and address 3
[ 19.088073] usb 2-2: configuration #1 chosen from 1 choice
[ 19.090531] usbcore: registered new interface driver hiddev
[ 19.105643] input: Plus More Enterprise LTD. USB-compliant keyboard as /devices/pci0000:00/0000:00:1d.1/usb2/2-1/2-1:1.0/input/input1
[ 19.115348] input,hidraw0: USB HID v1.10 Keyboard [Plus More Enterprise LTD. USB-compliant keyboard] on usb-0000:00:1d.1-1
[ 19.130588] input: Plus More Enterprise LTD. USB-compliant keyboard as /devices/pci0000:00/0000:00:1d.1/usb2/2-1/2-1:1.1/input/input2
[ 19.151263] input,hidraw1: USB HID v1.10 Mouse [Plus More Enterprise LTD. USB-compliant keyboard] on usb-0000:00:1d.1-1
[ 19.163416] input: Logitech USB-PS/2 Optical Mouse as /devices/pci0000:00/0000:00:1d.1/usb2/2-2/2-2:1.0/input/input3
[ 19.175204] input,hidraw2: USB HID v1.10 Mouse [Logitech USB-PS/2 Optical Mouse] on usb-0000:00:1d.1-2
[ 19.175216] usbcore: registered new interface driver usbhid
[ 19.175220] /home/juve/hardy-packages/linux-git/ubuntu-hardy/debian/build/custom-source-rtai/drivers/hid/usbhid/hid-core.c: v2.6:USB HID core driver
[ 19.307667] kjournald starting. Commit interval 5 seconds
[ 19.307677] EXT3-fs: mounted filesystem with ordered data mode.
[ 24.058244] Linux agpgart interface v0.102
[ 24.068305] iTCO_vendor_support: vendor-support=0
[ 24.069787] iTCO_wdt: Intel TCO WatchDog Timer Driver v1.02 (26-Jul-2007)
[ 24.069843] iTCO_wdt: failed to reset NO_REBOOT flag, reboot disabled by hardware
[ 24.069850] iTCO_wdt: No card detected
[ 24.075346] dcdbas dcdbas: Dell Systems Management Base Driver (version 5.6.0-3.2)
[ 24.084960] intel_rng: Firmware space is locked read-only. If you can't or
[ 24.084962] intel_rng: don't want to disable this in firmware setup, and if
[ 24.084964] intel_rng: you are certain that your system has a functional
[ 24.084965] intel_rng: RNG, try using the 'no_fwh_detect' option.
[ 24.527696] rtusb init --->
[ 24.527841]
[ 24.527843]
[ 24.527843] === pAd = f8a4f000, size = 557964 ===
[ 24.527844]
[ 24.527846] <-- RTMPAllocAdapterBlock, Status=0
[ 24.528084] usbcore: registered new interface driver rt2870
[ 26.162436] lp: driver loaded but no devices found
[ 26.286469] Adding 1485972k swap on /dev/sda5. Priority:-1 extents:1 across:1485972k
[ 26.812779] EXT3 FS on sda1, internal journal
[ 28.004477] ip_tables: (C) 2000-2006 Netfilter Core Team
[ 29.144355] ppdev: user-space parallel port driver
[ 29.322281] audit(1268430630.262:2): type=1503 operation="inode_permission" requested_mask="a::" denied_mask="a::" name="/dev/tty" pid=4154 profile="/usr/sbin/cupsd" namespace="default"
[ 30.779219] Bluetooth: Core ver 2.11
[ 30.781009] NET: Registered protocol family 31
[ 30.781013] Bluetooth: HCI device and connection manager initialized
[ 30.781016] Bluetooth: HCI socket layer initialized
[ 30.822270] Bluetooth: L2CAP ver 2.9
[ 30.822275] Bluetooth: L2CAP socket layer initialized
[ 30.879720] Bluetooth: RFCOMM socket layer initialized
[ 30.879732] Bluetooth: RFCOMM TTY layer initialized
[ 30.879734] Bluetooth: RFCOMM ver 1.8
[ 31.031632] <-- RTMPAllocTxRxRingMemory, Status=0
[ 31.047152] -->RTUSBVenderReset
[ 31.047575] <--RTUSBVenderReset
[ 31.340337] I/F(ra0) Key1Str is Invalid key length! KeyLen = 0!
[ 31.340355] I/F(ra0) Key2Str is Invalid key length! KeyLen = 0!
[ 31.340372] I/F(ra0) Key3Str is Invalid key length! KeyLen = 0!
[ 31.340389] I/F(ra0) Key4Str is Invalid key length! KeyLen = 0!
[ 31.343312] 1. Phy Mode = 5
[ 31.343315] 2. Phy Mode = 5
[ 31.372845] RTMPSetPhyMode: channel is out of range, use first channel=1
[ 31.386427] 3. Phy Mode = 5
[ 31.394035] MCS Set = ff ff 00 00 01
[ 31.403887] <==== RTMPInitialize, Status=0
[ 31.405754] 0x1300 = 00064300
[ 40.000219] ===>rt_ioctl_giwscan. 1(1) BSS returned, data->length = 113
[ 48.852977] NET: Registered protocol family 10
[ 48.853735] lo: Disabled Privacy Extensions
[ 48.854566] ADDRCONF(NETDEV_UP): eth0: link is not ready
[ 57.652365] NET: Registered protocol family 17
[ 59.017601] ra0: no IPv6 routers present
[ 72.903612] ===>rt_ioctl_giwscan. 1(1) BSS returned, data->length = 113
[ 72.903732] ==>rt_ioctl_siwfreq::SIOCSIWFREQ[cmd=0x8b04] (Channel=1)
[ 73.387296] Rcv Wcid(1) AddBAReq
[ 73.387300] Start Seq = 00000000
[ 89.594720] ra0: no IPv6 routers present
[ 92.763123] Rcv Wcid(1) AddBAReq
[ 92.763129] Start Seq = 00000000
[ 239.795537] I-pipe: Domain RTAI registered.
[ 239.795546] RTAI[hal]: <3.6.1> mounted over IPIPE-NOTHREADS 2.0-04.
[ 239.795548] RTAI[hal]: compiled with gcc version 4.2.4 (Ubuntu 4.2.4-1ubuntu3).
[ 239.795553] RTAI[hal]: mounted (IPIPE-NOTHREADS, IMMEDIATE (INTERNAL IRQs DISPATCHED), ISOL_CPUS_MASK: 0).
[ 239.795555] PIPELINE layers:
[ 239.795557] f89bf000 9ac15d93 RTAI 200
[ 239.795559] c0383180 0 Linux 100
[ 239.816398] RTAI[malloc]: global heap size = 2097152 bytes, <BSD>.
[ 239.816668] RTAI[sched]: loaded (IMMEDIATE, UP, USER/KERNEL SPACE: <with RTAI OWN KTASKs>, kstacks pool size = 524288 bytes.
[ 239.816674] RTAI[sched]: hard timer type/freq = 8254-PIT/1193180(Hz); default timing: periodic; linear timed lists.
[ 239.816677] RTAI[sched]: Linux timer freq = 250 (Hz), CPU freq = 3192249000 hz.
[ 239.816679] RTAI[sched]: timer setup = 2010 ns, resched latency = 2689 ns.
[ 239.895952] RTAI[math]: loaded.
[ 239.913491] rtapi: no version for "nano2count" found: kernel tainted.
[ 240.044794] config string '0x0378'
[ 242.105669] RTAI[math]: unloaded.
[ 242.160089] SCHED releases registered named ALIEN RTGLBH
[ 242.175234] RTAI[malloc]: unloaded.
[ 242.274789] RTAI[sched]: unloaded (forced hard/soft/hard transitions: traps 0, syscalls 0).
[ 242.277838] I-pipe: Domain RTAI unregistered.
[ 242.277844] RTAI[hal]: unmounted.
[ 313.817714] Rcv Wcid(1) AddBAReq
[ 313.817720] Start Seq = 00000000
[ 562.303686] I-pipe: Domain RTAI registered.
[ 562.303694] RTAI[hal]: <3.6.1> mounted over IPIPE-NOTHREADS 2.0-04.
[ 562.303696] RTAI[hal]: compiled with gcc version 4.2.4 (Ubuntu 4.2.4-1ubuntu3).
[ 562.303701] RTAI[hal]: mounted (IPIPE-NOTHREADS, IMMEDIATE (INTERNAL IRQs DISPATCHED), ISOL_CPUS_MASK: 0).
[ 562.303704] PIPELINE layers:
[ 562.303706] f89bf000 9ac15d93 RTAI 200
[ 562.303708] c0383180 0 Linux 100
[ 562.315816] RTAI[malloc]: global heap size = 2097152 bytes, <BSD>.
[ 562.316149] RTAI[sched]: loaded (IMMEDIATE, UP, USER/KERNEL SPACE: <with RTAI OWN KTASKs>, kstacks pool size = 524288 bytes.
[ 562.316155] RTAI[sched]: hard timer type/freq = 8254-PIT/1193180(Hz); default timing: periodic; linear timed lists.
[ 562.316158] RTAI[sched]: Linux timer freq = 250 (Hz), CPU freq = 3192249000 hz.
[ 562.316160] RTAI[sched]: timer setup = 2010 ns, resched latency = 2689 ns.
[ 562.387646] RTAI[math]: loaded.
[ 562.452838] config string '0x0378'
[ 563.503892] RTAI[math]: unloaded.
[ 563.557918] SCHED releases registered named ALIEN RTGLBH
[ 563.572860] RTAI[malloc]: unloaded.
[ 563.672443] RTAI[sched]: unloaded (forced hard/soft/hard transitions: traps 0, syscalls 0).
[ 563.676648] I-pipe: Domain RTAI unregistered.
[ 563.676656] RTAI[hal]: unmounted.
[ 594.972079] Rcv Wcid(1) AddBAReq
[ 594.972085] Start Seq = 00000000
[ 710.661871] I-pipe: Domain RTAI registered.
[ 710.661879] RTAI[hal]: <3.6.1> mounted over IPIPE-NOTHREADS 2.0-04.
[ 710.661881] RTAI[hal]: compiled with gcc version 4.2.4 (Ubuntu 4.2.4-1ubuntu3).
[ 710.661887] RTAI[hal]: mounted (IPIPE-NOTHREADS, IMMEDIATE (INTERNAL IRQs DISPATCHED), ISOL_CPUS_MASK: 0).
[ 710.661889] PIPELINE layers:
[ 710.661891] f89bf000 9ac15d93 RTAI 200
[ 710.661893] c0383180 0 Linux 100
[ 710.673806] RTAI[malloc]: global heap size = 2097152 bytes, <BSD>.
[ 710.674128] RTAI[sched]: loaded (IMMEDIATE, UP, USER/KERNEL SPACE: <with RTAI OWN KTASKs>, kstacks pool size = 524288 bytes.
[ 710.674134] RTAI[sched]: hard timer type/freq = 8254-PIT/1193180(Hz); default timing: periodic; linear timed lists.
[ 710.674138] RTAI[sched]: Linux timer freq = 250 (Hz), CPU freq = 3192249000 hz.
[ 710.674140] RTAI[sched]: timer setup = 2010 ns, resched latency = 2689 ns.
[ 710.745022] RTAI[math]: loaded.
[ 724.647848] RTAI[math]: unloaded.
[ 724.703300] SCHED releases registered named ALIEN RTGLBH
[ 724.717378] RTAI[malloc]: unloaded.
[ 724.816899] RTAI[sched]: unloaded (forced hard/soft/hard transitions: traps 0, syscalls 0).
[ 724.820814] I-pipe: Domain RTAI unregistered.
[ 724.820822] RTAI[hal]: unmounted.
[ 823.702003] I-pipe: Domain RTAI registered.
[ 823.702011] RTAI[hal]: <3.6.1> mounted over IPIPE-NOTHREADS 2.0-04.
[ 823.702013] RTAI[hal]: compiled with gcc version 4.2.4 (Ubuntu 4.2.4-1ubuntu3).
[ 823.702018] RTAI[hal]: mounted (IPIPE-NOTHREADS, IMMEDIATE (INTERNAL IRQs DISPATCHED), ISOL_CPUS_MASK: 0).
[ 823.702021] PIPELINE layers:
[ 823.702023] f89bf000 9ac15d93 RTAI 200
[ 823.702025] c0383180 0 Linux 100
[ 823.714386] RTAI[malloc]: global heap size = 2097152 bytes, <BSD>.
[ 823.714719] RTAI[sched]: loaded (IMMEDIATE, UP, USER/KERNEL SPACE: <with RTAI OWN KTASKs>, kstacks pool size = 524288 bytes.
[ 823.714725] RTAI[sched]: hard timer type/freq = 8254-PIT/1193180(Hz); default timing: periodic; linear timed lists.
[ 823.714728] RTAI[sched]: Linux timer freq = 250 (Hz), CPU freq = 3192249000 hz.
[ 823.714731] RTAI[sched]: timer setup = 2010 ns, resched latency = 2689 ns.
[ 823.784859] RTAI[math]: loaded.
[ 823.865206] config string '0x378 out '
[ 825.323166] RTAI[math]: unloaded.
[ 825.377391] SCHED releases registered named ALIEN RTGLBH
[ 825.392713] RTAI[malloc]: unloaded.
[ 825.492294] RTAI[sched]: unloaded (forced hard/soft/hard transitions: traps 0, syscalls 0).
[ 825.495683] I-pipe: Domain RTAI unregistered.
[ 825.495691] RTAI[hal]: unmounted.

Debug file information:
Traceback (most recent call last):
File "/usr/bin/axis", line 3791, in <module>
o = MyOpengl(widgets.preview_frame, width=400, height=300, double=1, depth=1)
File "/usr/bin/axis", line 343, in __init__
Opengl.__init__(self, *args, **kw)
File "debian/tmp/usr/lib/python2.5/site-packages/rs274/OpenGLTk.py", line 219, in __init__
File "debian/tmp/usr/lib/python2.5/site-packages/rs274/OpenGLTk.py", line 167, in __init__
File "debian/tmp/usr/lib/python2.5/site-packages/rs274/OpenGLTk.py", line 93, in __init__
File "/usr/lib/python2.5/lib-tk/Tkinter.py", line 1933, in __init__
(widgetName, self._w) + extra + self._options(cnf))
_tkinter.TclError: Togl: X server has no OpenGL GLX extension
5905
PID TTY STAT TIME COMMAND
6033
PID TTY STAT TIME COMMAND
Stopping realtime threads
Unloading hal components

I figured it out by doing some searches on line. I just reinstalled the operating system and everything is fine now. I'm pretty sure all the Nvidia drivers I tried caused the problem.